Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq21656 125 2e-23 seq25668 118 2e-21 >seq21656 Length=48212 Score = 125 bits (138), Expect = 2e-23 Identities = 163/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | || |||||||| || || || || || ||||||||||| || | | || Sbjct 943 CTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTG 884 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || ||| || |||||||| |||||||||||||| | | || ||| Sbjct 883 CGACCATCTTCAAGCTGTTTACCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCT 824 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || || || |||||| || ||| |||| | | |||| ||| ||| || ||| Sbjct 823 TCTTTGTCCTGGATTTTTGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCA 767 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || || |||||||| |||| |||||| Sbjct 766 AGAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 723 Score = 122 bits (134), Expect = 2e-22 Identities = 164/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | || |||||||| || || || || || ||||||||||| || | | || Sbjct 487 CTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTG 428 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || ||| || |||||||| |||||||||||||| | | || ||| Sbjct 427 CGACCATCTTCAAGCTGTTTACCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCT 368 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || || || |||||| || ||| | || | | |||| ||| ||| || ||| Sbjct 367 TCTTTGTCCTGGATTTTTGCCTTCACATTTTCAATGGTGTC---ACTGGGCTCAACCTCA 311 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||| || || |||||||| |||| |||||| || Sbjct 310 AGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 264 Score = 114 bits (126), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || || || || ||||||||||| || | | || | |||||| Sbjct 706 AGCACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCT 647 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| |||||||||||||| | | || ||||| || || Sbjct 646 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 587 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | |||| ||| ||| || |||||||| || Sbjct 586 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCAAGAGTGATG 530 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 529 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 495 Score = 114 bits (126), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| || || || || || ||||||||||| |||| | || | ||||| Sbjct 1162 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTACGACCATCC 1103 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| |||||||||||||| | | || ||||| || || Sbjct 1102 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 1043 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | |||| ||| ||| || |||||||| || Sbjct 1042 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCAAGAGTGATG 986 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 985 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 951 >seq25668 Length=3966 Score = 118 bits (130), Expect = 2e-21 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | || || | || ||||| || || || |||||||||||||| | | || Sbjct 410 CCTGAGGCGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAGGGT 351 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||||||| || || || || ||||| |||||||||||||| | | ||| || Sbjct 350 GCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 291 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || || ||| |||| | | |||| ||| || || || Sbjct 290 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAG 231 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| ||||| ||||||||||||| |||||| || Sbjct 230 GGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATGTT 186 Score = 109 bits (120), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| ||||| || || || ||||| ||||| || | | || | ||||||| Sbjct 628 AGCACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCT 569 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| | |||||||||||| | | ||| |||||||| || Sbjct 568 TCCAGTTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 509 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | | || ||| || ||||| || || || Sbjct 508 TGGATCTTGGCCTTCACATTCTCAATGTTATC---ACTGGGTTCAACTTCCAGGGTGATG 452 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 451 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 417 Score = 109 bits (120), Expect = 1e-18 Identities = 160/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | | ||| | || ||||| || || || ||||||||||| || | | || Sbjct 866 CCTGAGGCGCAAGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGT 807 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||||||| || || || || || || |||||||||||||| | | ||| || Sbjct 806 GCGCCCATCTTCCAGCTGCTTGCCAGCAAATATCAGCCTCTGCTGGTCAGGGGGGATGCC 747 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 |||||| || || || || || ||| |||| | | || ||| ||| || || Sbjct 746 TTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATAGTATC---ACTCGGCTCGACCTC 690 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || ||||| ||||| ||||||||||||| |||||| Sbjct 689 AAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 645 Score = 105 bits (116), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| || || ||||| || ||||||||||| || | | || | ||||||| Sbjct 1084 AGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1025 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || || || |||||||||||||| | | || || ||||| || Sbjct 1024 TCCAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCC 965 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 ||||| || || ||| |||| | | | || ||| || ||||| || || || Sbjct 964 TGAATCTTGGCCTTCACATTCTCAATGGTATC---ACTGGGTTCAACTTCCAGGGTGATG 908 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || |||||||| |||| |||||| Sbjct 907 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153197239182780