Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq25668 149 5e-31 seq21656 131 1e-25 >seq25668 Length=3966 Score = 149 bits (164), Expect = 5e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | || ||||| ||| || ||| ||||| |||||||||||||| Sbjct 419 CATACCACCCCTGAGGCGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAATC 360 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || ||||||||||| || |||||||||| | |||||| || | Sbjct 359 AGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGG 300 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||||| | | ||||||||| || || Sbjct 299 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTC 240 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| || || ||||| || |||||||||||||||||||| |||||| Sbjct 239 CACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 188 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || ||| || || || ||| ||||| ||||| ||||| || Sbjct 647 CATACCACCTCTCAGGCGCAGCACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAGTC 588 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || ||||| ||||| || ||||||||||| | |||||| || | Sbjct 587 AGACAGGGTGCGCCCATCTTCCAGTTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGG 528 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||||| | | ||| | || || ||| Sbjct 527 GGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGTTATCACTGGGTTC 468 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 467 AACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 417 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||||||| | || ||| || || || ||| |||||| ||||||||||| || | Sbjct 1099 CCACCTCTCAGGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1040 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| | || ||||| ||||| || ||||| |||| | |||||| |||| || Sbjct 1039 AGGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGA 980 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| ||||| ||||| | | ||||| || || ||| || Sbjct 979 ATGCCCTCCTTATCCTGAATCTTGGCCTTCACATTCTCAATGGTATCACTGGGTTCAACT 920 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || ||||| || || ||||||||||| ||||| ||||| Sbjct 919 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 873 Score = 114 bits (126), Expect = 9e-21 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | ||| |||| ||| || ||| ||||| ||||||||||| || Sbjct 875 CATACCACCCCTGAGGCGCAAGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTC 816 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || ||||||||||| || ||||| |||| | |||||| || | Sbjct 815 AGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAATATCAGCCTCTGCTGGTCAGG 756 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||||| | | || || || | || Sbjct 755 GGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATAGTATCACTCGGCTC 696 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| || |||||||||||||||||||| ||||| Sbjct 695 GACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 645 >seq21656 Length=48212 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || ||| || ||||| ||| ||||| ||||||||||| || Sbjct 725 CATGCCACCTCTCAGACGCAGCACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTC 666 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || |||||||||| | |||||| || | Sbjct 665 AGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGG 606 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || ||| ||||| ||||| | | |||||||| || || Sbjct 605 GGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTC 546 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | || || ||||| || || ||||||||||||||||| |||||| Sbjct 545 AACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 494 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || ||| || || || ||| ||||| ||||||||||| |||| Sbjct 1177 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 1118 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || ||||||||||| || |||||||||| | |||||| || | || Sbjct 1117 AGGGTACGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 1058 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||||| || ||| ||||| ||||| | | |||||||| || || ||| Sbjct 1057 ATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACC 998 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | || || ||||| || || ||||||||||||||||| |||||| Sbjct 997 TCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 950 Score = 104 bits (114), Expect = 2e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | || ||| || || || ||| ||||| ||||||||||| || Sbjct 497 CATGCCACCTCTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 438 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || ||||| || || || ||||||| | |||||| || | Sbjct 437 AGACAGGGTGCGACCATCTTCAAGCTGTTTACCAGCGAAGATCAGCCTCTGCTGGTCAGG 378 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || ||| || || ||||| || | |||||||| || || Sbjct 377 GGGAATGCCTTCTTTGTCCTGGATTTTTGCCTTCACATTTTCAATGGTGTCACTGGGCTC 318 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| | || || ||||| || || ||||||||||| ||||| |||||| || Sbjct 317 AACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTG 263 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | || ||| || || || ||| ||||| ||||||||||| || Sbjct 953 CATGCCACCTCTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 894 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || ||||| || || || ||||||| | |||||| || | Sbjct 893 AGACAGGGTGCGACCATCTTCAAGCTGTTTACCAGCGAAGATCAGCCTCTGCTGGTCAGG 834 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || ||| || || ||||| | | |||||||| || || Sbjct 833 GGGAATGCCTTCTTTGTCCTGGATTTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTC 774 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | || || ||||| || || ||||||||||| ||||| |||||| Sbjct 773 AACCTCAAGAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359805340185060