Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nipponia_20nippon_20[refseq_20GCF_5F000708225.1_202014-06-16]
59,555 sequences; 1,223,863,029 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq2428 89.7 4e-13
>seq2428
Length=1050118
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/211 (70%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| ||||| || || || || |||||||| ||| |||| | | | ||||| | ||
Sbjct 346558 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCCAGCTG 346617
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|||||||| | |||| | ||| || ||| ||||| ||||||||||| || ||
Sbjct 346618 CTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 346677
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || ||| | || || || || || || || || | ||| ||||| || || ||
Sbjct 346678 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGT 346737
Query 15153 CAGAGTTTTTACAAAAATTTGCATATTTGAA 15183
||| || || ||||| || ||||| ||||||
Sbjct 346738 CAGGGTCTTCACAAAGATCTGCAT-TTTGAA 346767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357132595393175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |