Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nipponia_20nippon_20[refseq_20GCF_5F000708225.1_202014-06-16] 59,555 sequences; 1,223,863,029 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3413 87.8 2e-12 >seq3413 Length=458949 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 || ||||| || ||||||||||| ||||||||| | |||||| |||| | ||||||| Sbjct 396103 GAGACCGGCACACCGTACATGCTGTACAAAGACTCTTGCAACCGGAAGAGCAATCAGCAG 396044 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 |||||||| || || ||||| || ||||| || | ||||| Sbjct 396043 AACTTGGGGACCATCAAATGCAGCAATCTGTGTACAGAAAT 396003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451666711867800