Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nipponia_20nippon_20[refseq_20GCF_5F000708225.1_202014-06-16] 59,555 sequences; 1,223,863,029 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq4031 122 7e-22 >seq4031 Length=5211696 Score = 122 bits (134), Expect = 7e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| ||| | ||||||||||| ||||| |||||||| || ||||| ||||| Sbjct 1532093 GTTACCAATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 1532034 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||| || || || || || || || |||||||| || || ||| Sbjct 1532033 AAAGATGCTGGAACCATTGCAGGGCTCAACGTACTGCGAATCATCAATGAGCCGACAGCT 1531974 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 ||||| | || ||||| || || ||| Sbjct 1531973 GCTGCGATAGCCTATGGTCTGGACAAA 1531947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4026146463006950