Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nipponia_20nippon_20[refseq_20GCF_5F000708225.1_202014-06-16] 59,555 sequences; 1,223,863,029 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4692 116 7e-21 >seq4692 Length=2433184 Score = 116 bits (128), Expect = 7e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| ||||| ||||| ||||| ||||| || | | ||||| || ||| Sbjct 54153 AGGACCTTCTGCTTGAGCTGGGCGACCTGCTCCCGGAGCAGGCTGGCGGTGGAGGCCAGC 54094 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | ||| || |||||| ||||||||||| || | ||| || ||||| Sbjct 54093 TCCGTGTTCTGGCTCTTCAGGCTCTTCACCTTCTCCTCCAGGCGGGAGATCCGCTCCAGC 54034 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || | | |||||| |||| ||| || | ||||||| || | || |||||||||||| Sbjct 54033 TTCCTCTTGCGGCACTTGGAGGCGGCGATACGGTTCCTCAGCCGTTTGCGTTCCGCCTTG 53974 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || || ||||| ||||||||||| || || Sbjct 53973 ATACGCTCCTGCGTGTCCATGTCGATGGGGGA 53942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930839332051200