Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nipponia_20nippon_20[refseq_20GCF_5F000708225.1_202014-06-16] 59,555 sequences; 1,223,863,029 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq59553 87.8 2e-12 >seq59553 Length=16526472 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 |||| ||||| || | ||| || ||||| |||||||| | ||||| | |||||||| | Sbjct 12729301 CACCGTAAGGCGATCTTGGGTAAAAAGGGGTGGTCTCCTTTTGTGGGATTTCTTGCACTT 12729360 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | ||| |||||||||||||||| ||||| |||| Sbjct 12729361 TTCCAAAAAGTTCACTGGTGGAGGCTTGGTAGA 12729393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664998981012600