Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq35 113 3e-20 seq2 91.5 1e-13 >seq35 Length=75253249 Score = 113 bits (124), Expect = 3e-20 Identities = 88/105 (84%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| || ||| ||||||| || | |||||||||| |||||| ||| || ||||||||||| Sbjct 63606409 CTTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAGAGGACGATTCTTCTCAGG 63606350 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTT 4394 ||| |||||||| || ||||||||||| |||| | ||||||||| Sbjct 63606349 AATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTT 63606305 >seq2 Length=147128157 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 |||||||| ||||||||| | || | | |||||||| ||||| || || ||||||||| Sbjct 100570635 GTGACATGGGCAATCATGTATGTGAGCAACGAATAGCTGGCAATATTGAAAGGCACTCCT 100570694 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 | |||||||| | || || ||||||||||| || || || | |||| ||||| Sbjct 100570695 AGTCCCATATCTCCAGACCTCTGATACAGTTGGCAAGACAGTTCACCATTTTGAACATAG 100570754 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCT 101920 || || | | |||| ||||| ||||| |||| || ||| ||| Sbjct 100570755 AACTGGCAAAGAGCATGGCAAGGTGGCAAAGCCATCAGAGAAATATCT 100570802 Score = 89.7 bits (98), Expect = 4e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||||||||| || |||||||| || || ||||| || ||||| | || || | Sbjct 100574221 CTTTGTATTCTGCTCCAAAGTGCCTCCATTGGAAACCATAAACTGGTCCCAAGTCCCCCT 100574280 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||| |||| || | ||||| || || | |||||||| |||||||||| Sbjct 100574281 CTTCTCTGGTGCAAAACCCCTGCTTATCCAAGAACTCACGTGATCCATTGGCATCCCAAA 100574340 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | | ||| || ||| || ||||| ||| Sbjct 100574341 TCTTCACACCCTTTGCAGAGAGCTCCTTG 100574369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361240342820966