Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2 107 1e-18 >seq2 Length=147128157 Score = 107 bits (118), Expect = 1e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||||||||| |||||||| ||||| | ||| || |||||| Sbjct 100574226 TATTCTGCTCCAAAGTGCCTCCATTGGAAACCATAAACTGGTCCCAAGTCCCCCTCTTCT 100574285 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || || || || ||||||| || | | |||||||| ||||||||||| | | Sbjct 100574286 CTGGTGCAAAACCCCTGCTTATCCAAGAACTCACGTGATCCATTGGCATCCCAAATCTTC 100574345 Query 97522 ACACCAGATGCTGCAAGCTCTTTG 97545 ||||| ||| | ||||| ||| Sbjct 100574346 ACACCCTTTGCAGAGAGCTCCTTG 100574369 Score = 87.8 bits (96), Expect = 1e-12 Identities = 132/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | | |||||||| ||||| || |||||||| ||| Sbjct 100570635 GTGACATGGGCAATCATGTATGTGAGCAACGAATAGCTGGCAATATTGAAAGGCACTCCT 100570694 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || || | |||| ||||| Sbjct 100570695 AGTCCCATATCTCCAGACCTCTGATACAGTTGGCAAGACAGTTCACCATTTTGAACATAG 100570754 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| | | |||| || || ||||| ||||| | || ||||| || ||| ||| Sbjct 100570755 AACTGGCAAAGAGCATGGCAAGGTGGCAAAGCCATCAGAGAAATATCTAGGA-ATTACAA 100570813 Query 97297 GCACA 97301 |||| Sbjct 100570814 -CACA 100570817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346773577623620