Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq23 107 2e-18 seq1 84.2 2e-11 >seq23 Length=10219231 Score = 107 bits (118), Expect = 2e-18 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-T 139605 || |||| || | ||| | || ||||| || || ||||| || || || |||| | Sbjct 6724569 AAGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGT 6724510 Query 139606 CGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTC 139665 | | ||||| || || || |||||| ||||||| | |||||||||||||| |||||||| Sbjct 6724509 CCA-TCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTC 6724451 Query 139666 TTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGG 139724 ||||| ||| | || | || | | ||| | ||||| ||||||| ||||||| || Sbjct 6724450 CTTGTC-TTGAATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAACCTCAAGGG 6724392 Query 139725 TCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | | |||||||| |||| || || || || || ||||| Sbjct 6724391 TGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 6724352 >seq1 Length=194437802 Score = 84.2 bits (92), Expect = 2e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 153684 ACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTT-TGATTGCTTTT 153742 |||||||| | |||| |||||||||||| || | || ||| | || |||||||| || Sbjct 192641665 ACTATTTCTGTGCACAGATTGCTGCATTTGATG-GTCCCCAAGTTCTGCTGATTGCTCTT 192641723 Query 153743 GCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787 | ||| |||| ||| ||||| |||||||| ||||||||||| || Sbjct 192641724 CCTGTTGCAAGAGTCTTTGTACAGCATGTAAGGTGTGCCGGTCTC 192641768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496048708827200