Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 2e-12 >seq3 Length=112045409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| ||||| || || || | ||| ||||||||| ||||| | ||| ||||| Sbjct 97250741 GAATCTTTAATGTACGTGTCAATGAGAAGACTATACATTTCTGAATGTATATTTTCCATG 97250682 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463 || || ||||| || |||||||| | ||||| ||||| |||||||||||| Sbjct 97250681 GCTATCTGGAAGCCATAGAAACAACGCGCTTCTGTGATTTGCACTTCTTGA 97250631 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223 |||| |||||| |||||||| ||||| |||||| ||||| || ||||| |||||||| Sbjct 97252341 CCTCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAGAAGAATATTCCTTCCACT 97252282 Query 93224 GCTGCAAATGCCACAATACGTTC 93246 ||||||||||| || | |||||| Sbjct 97252281 GCTGCAAATGCTACTACACGTTC 97252259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556843634765840