Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 seq23 86.0 6e-12 >seq1 Length=194437802 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701 |||| ||| || || | ||| || ||||||||||| ||| ||||| || ||||||||| Sbjct 192641659 TACTCCACTATTTCTGTGCACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 192641718 Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTT 153761 || || | ||||| | ||||||| | |||||||| ||| ||||||||| |||| Sbjct 192641719 CTCTTCCTGTTGCAAGAGTCTTTGTACAGCATGTAAGGTGTGCCGGTCTCCGTCTGCGAC 192641778 Query 153762 TCGACGAT 153769 |||| ||| Sbjct 192641779 TCGATGAT 192641786 >seq23 Length=10219231 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || || || ||||| || || | | Sbjct 6724545 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGTTGCTTGCCAGCA 6724486 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| || | ||| || || ||||| || ||||| ||||| ||| | || | || | Sbjct 6724485 AAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTC-TTGAATCTTGGCCTTCAC 6724427 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | |||||| | | ||| ||||| | || | || || |||||||| || || Sbjct 6724426 ATTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTT 6724367 Query 138600 TACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 6724366 CACAAAGATCTGCATG 6724351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496247102711520