Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq23 127 5e-24 seq19 122 2e-22 >seq23 Length=10219231 Score = 127 bits (140), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || || ||||| || | || || | |||||||| Sbjct 6724560 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCC 6724501 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || | || || || |||||||||||||| ||||||||| Sbjct 6724500 AGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGA 6724441 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| || || ||||||||||| ||| || || |||||||| | ||| Sbjct 6724440 ATCTTGGCCTTCACATTTTCAATGGTGTC---ACTGGGCTCAACCTCAAGGGTGATGGTC 6724384 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 6724383 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 6724352 >seq19 Length=13198683 Score = 122 bits (134), Expect = 2e-22 Identities = 162/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 || || | || |||||| || ||||||||||| || || || ||||| || | || || Sbjct 4747643 CTCAGGCGCAGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 4747584 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | ||| ||||| |||||||| || || ||||| || | || || || || ||||||||| Sbjct 4747583 CGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCT 4747524 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 || ||||| || || || |||||| ||||| ||||| || ||| |||||| || Sbjct 4747523 TCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTATC---ACTGGGTTCCACCTCC 4747467 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||| | ||||| || || | || || ||||| | ||||| Sbjct 4747466 AAGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4747423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109446545235422