Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 seq2 82.4 9e-11 >seq1 Length=194437802 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || || || | || ||||||||||| || ||||| || ||||| ||||| || Sbjct 192641795 TGGTACGCCATCATCGAGTCGCAGACGGAGACCGGCACACCTTACATGCTGTACAAAGAC 192641736 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 |||| |||| |||||| || || |||| ||||| || ||||| || ||||| ||| Sbjct 192641735 TCTTGCAACAGGAAGAGCAATCAGCAGAACTTGGGGACCATCAAATGCAGCAATCTGTGC 192641676 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || ||||| | ||||| || || |||||| Sbjct 192641675 ACAGAAATAGTGGAGTATACCAGCAAAGATGAG 192641643 >seq2 Length=147128157 Score = 82.4 bits (90), Expect = 9e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| ||||| || || || |||||||| || || ||||| ||| ||||| | |||| Sbjct 127698188 TTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCATT-TGCTGCTATATTTTGG 127698130 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| |||| || ||||| || | ||||| |||||||||||| | ||||| Sbjct 127698129 CTGAAGAAGAGGGGCCTGATGCCTGGATTGACTTTCTCCAATGAACTTATTAGCAGAGAT 127698070 Query 65206 GAGG 65209 |||| Sbjct 127698069 GAGG 127698066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596551210742080