Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq23 125 6e-24 seq19 87.8 2e-12 >seq23 Length=10219231 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| Sbjct 6724352 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 6724411 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||| |||||||| ||||| || ||||||||||| Sbjct 6724412 GACACCATTGAAAATGTGAAGGCCAAGATTCAAGACAAGGAAGGCATTCCTCCCGATCAG 6724471 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || || ||||| ||| | | | |||| || || ||| Sbjct 6724472 CAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACCCTGTCTGACTACAAC 6724531 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| ||||| |||| ||| | ||||| Sbjct 6724532 ATCCAGAAGGAGTCCACTCTCCACCTGGTGCTGCGCTTGAGGGGAGG 6724578 >seq19 Length=13198683 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | || || ||| ||| Sbjct 4747423 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTGGAACCCAGT 4747482 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 4747483 GATACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 4747542 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| || | | | | |||| || || ||| Sbjct 4747543 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 4747602 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || ||||| || || || || |||| Sbjct 4747603 ATCCAGAAGGAGTCCACTCTCCATCTTG 4747630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449883731906480