Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq23 154 1e-32 seq19 125 5e-24 >seq23 Length=10219231 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | ||| |||||||| | ||| ||||||||| ||||| ||||| || Sbjct 6724578 CCTCCCCTCAAGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 6724519 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||||||||| || || |||||||| | ||||| || | || Sbjct 6724518 AGGGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 6724459 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || || | | || | ||| ||| ||| || Sbjct 6724458 ATGCCTTCCTTGTCTTGAATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAACC 6724399 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 6724398 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 6724351 >seq19 Length=13198683 Score = 125 bits (138), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || || || | ||| ||||||||| ||||| ||||| || Sbjct 4747649 CCACCCCTCAGGCGCAGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4747590 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| | || ||||| ||||| || || |||||||| | ||||| || | || Sbjct 4747589 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 4747530 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || |||||||| | || || ||||| || || || | ||| ||| || | Sbjct 4747529 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCGATGGTATCACTGGGTTCCA 4747472 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||| |||||||| || ||||||||||| || |||||||||||| Sbjct 4747471 CCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 4747422 Score = 86.0 bits (94), Expect = 4e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || || |||||||| | ||||| || | || | ||||||||||| | Sbjct 4747799 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 4747740 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || || ||| | || | ||| ||| |||||| || | || |||||||| Sbjct 4747739 ATCTTGGCCTTCACGTTCTCAATGGTATCACTGGGCTCGACCTCCAGTGTGATGGTCTTG 4747680 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||||||||| ||||||||||||||| Sbjct 4747679 CCAGTGAGGGTCTTCACAAAGATCTGCATG 4747650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325683011506454