Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq23 150 1e-31 >seq23 Length=10219231 Score = 150 bits (166), Expect = 1e-31 Identities = 176/234 (75%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| |||||||||| || || ||||| || || || ||||| || || | Sbjct 6724578 CCTCCCCTCAAGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 6724519 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || ||||| ||||||||| | |||| || |||||||| || ||| Sbjct 6724518 AGGGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 6724459 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| ||| || | || ||| |||| | |||||| | || || Sbjct 6724458 ATGCCTTCCTTGTCTTG-AATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAAC 6724400 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT-TTTAA 29791 ||||| || || || |||||||| | ||| || ||||| |||||||| ||||| Sbjct 6724399 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTTAA 6724346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385207622477706