Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq13 150 2e-31 >seq13 Length=20192527 Score = 150 bits (166), Expect = 2e-31 Identities = 251/358 (70%), Gaps = 6/358 (2%) Strand=Plus/Plus Query 162629 CCTTCAGCTGACGCACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGAT 162688 ||| |||| ||| |||||||| |||||||| | ||| ||||||||||||||| | Sbjct 4753086 CCTGCAGCGCACGGACCATCTCCGCGTTGGTCTTGATGGGGAAGTCGGTGCCGCAGGTGT 4753145 Query 162689 TAATAACATATTTCCACTTAACGCTGAGTCCGTA-CAGATCCTGTAGACAGTTCAGATCG 162747 | | || || ||| ||| | || | | ||| ||||| | ||||| || ||| Sbjct 4753146 TGAGGACGTAGCGCCAGGGCACGGGGC-TCTGCAGCAGGTCCTGCATGCAGTTGAGGTCG 4753204 Query 162748 GCCTGGACGCGACTCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACA 162807 ||||| | || ||| || |||||||| |||||||||| | |||| || ||||| Sbjct 4753205 GCCTGCAGCCGGGACCAGGAGGCGTACACCACGCTCTCCAGGCGGCTGGCCACGAAGACG 4753264 Query 162808 TTGTCGAAACACGAAACTATCCCCATCACGGCCAGTGAGAA--CATCGGGTCCGCTTTCC 162865 ||| ||| || | | || || ||||||| | ||| | |||| ||||| | Sbjct 4753265 TTGGGGAAGCAGGCGGCGATGGCCCGCACGGCCTGCTGGAAGGCGGCGGGG--GCTTTGC 4753322 Query 162866 TATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGA 162925 | || ||||| |||||||| | ||||| |||||||||| | | ||| | | ||||| Sbjct 4753323 TGTCCACGTGGACGCAGTAGACGTTCTGCGGGGCGTAGAGAGAGCGCAGGAGCCGCTCGA 4753382 Query 162926 ACATCTCTATCTTATGGTGTACCACGATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983 ||||||| ||||| ||||| | || || || || || |||||||| || |||||||| Sbjct 4753383 ACATCTCGATCTTGTGGTGGATGACCATGGAGTAGGCGATGGGGAAGTCGGCCTCCTC 4753440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578414169833600