Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq23 113 3e-20 seq19 95.1 8e-15 >seq23 Length=10219231 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || ||||| || | ||||| || |||||| ||| || || |||||||| || || Sbjct 6724579 ACCTCCCCTCAAGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 6724520 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || |||||| | || |||| ||| || || ||||| |||| | ||||||||| | || Sbjct 6724519 CAGGGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGG 6724460 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||| || |||| ||| ||| |||||| || | || | Sbjct 6724459 AATGCCTTCCTTGTCTTGAATCTTGGCCTTCA-CATTTTCAATGGTGTCACTGGGCTCAA 6724401 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| || || || || | || || |||||||||||||| Sbjct 6724400 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 6724352 >seq19 Length=13198683 Score = 95.1 bits (104), Expect = 8e-15 Identities = 166/238 (70%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| || | || | ||| |||||| ||| || || |||||||| || || Sbjct 4747649 CCACCCCTCAGGCGCAGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4747590 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || ||||| |||| | ||||||||| | || Sbjct 4747589 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 4747530 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| || | ||| || || | |||||| Sbjct 4747529 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCGATGGTATCACTGGGTTCCAC 4747471 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGTG 33759 || | ||||| || || || || | || || || ||||||||||| |||||| || Sbjct 4747470 CTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT-GTTGGTCTG 4747414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328694121006720