Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq23 86.0 5e-12 >seq23 Length=10219231 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| |||| |||| || | || || || || || || |||||||| | Sbjct 6724578 CCTCCCCTCAAGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 6724519 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| || || || || || | || || | ||| ||||| || || Sbjct 6724518 AGGGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 6724459 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| |||| |||| | ||||| ||| ||||| Sbjct 6724458 ATGCCTTCCTTGTCTTGAATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAACC 6724399 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| ||||| || ||||||||||| ||||| Sbjct 6724398 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 6724352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424921628862192