Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq2 105 5e-18 >seq2 Length=147128157 Score = 105 bits (116), Expect = 5e-18 Identities = 121/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || ||||||||||||||||| | || || ||||| || || ||||| Sbjct 100570632 CCTGTGACATGGGCAATCATGTATGTGAGCAACGAATAGCTGGCAATATTGAAAGGCACT 100570691 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTA-TTTTGTGACAC 111896 ||||| ||||||||||| || || ||||| || || || || |||| | || ||| || Sbjct 100570692 CCTAGTCCCATATCTCCAGACCTCTGATACAGTTGGCAAGACAGTTCACCATTTTGA-AC 100570750 Query 111897 ATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||| || || ||||| |||| ||||| ||||| |||||| Sbjct 100570751 ATAGAACTGGCAAAGAGCATGGCAAGGTGGCAAAGCCATC 100570790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391933820319958