Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 6e-12 >seq2 Length=147128157 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||| ||||| ||||| || || || || |||||||| ||||| || Sbjct 100574226 TATTCTGCTCCAAAGTGCCTCCATTGGAAACCATAAACTGGTCCCAAGTCCCCCTCTTCT 100574285 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | |||||| |||| |||| || || || || || | || ||||| |||||| Sbjct 100574286 CTGGTGCAAAACCCCTGCTTATCCAAGAACTCACGTGATCCATTGGCATCCCAAATCTTC 100574345 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043 || ||| | ||||||||||||| Sbjct 100574346 ACACCCTTTGCAGAGAGCTCCTTGG 100574370 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361 ||||||||||||| | ||| |||||||| ||||| || | || || || || || Sbjct 100574370 CCAAGGAGCTCTCTGCAAAGGGTGTGAAGATTTGGGATGCCAATGGATCACGTGAGTTCT 100574311 Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421 |||| |||| |||||| | | || ||||| |||||||| || || || || |||| Sbjct 100574310 TGGATAAGCAGGGGTTTTGCACCAGAGAAGAGGGGGACTTGGGACCAGTTTATGGTTTCC 100574251 Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446 | ||||| |||||||| || || || Sbjct 100574250 AATGGAGGCACTTTGGAGCAGAATA 100574226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448248582311520