Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq2 102 7e-17 >seq2 Length=147128157 Score = 102 bits (112), Expect = 7e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 |||||||| | || |||||||||||||| | ||| |||||||| | ||| ||||| Sbjct 100570629 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAACGAATAGCTGGCAATATTGAAAGGC 100570688 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || || || ||||| ||| | || ||||| |||| ||||||||| || || || ||| | Sbjct 100570689 ACTCCTAGTCCCATATCTCCAGACCTCTGATACAGTTGGCAAGACAGTTCACCATTTTGA 100570748 Query 118654 ACATAAAACTG 118664 ||||| ||||| Sbjct 100570749 ACATAGAACTG 100570759 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||||||||| |||||||| |||||||| || || | || ||||| ||| Sbjct 65733472 GTGGTGGAGGAGCTCTTCCGTGATGGGGTCAACTGGGGCCGGATCATCGCCTTCTTCGAG 65733531 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || || | || ||||| || || |||||||| | | || | | || || |||||| Sbjct 65733532 TTCGGCAGCGTGATGTGCGTCGAGAGCGTCAACCGGGAGATGTCGCCGCTGGTGGACAAC 65733591 Query 3365 ATTGCCGCGTGGATGACAGA 3384 |||||| | |||||||| || Sbjct 65733592 ATTGCCACCTGGATGACTGA 65733611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414464343158824