Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 >seq2 Length=147128157 Score = 127 bits (140), Expect = 2e-24 Identities = 131/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| |||| |||||||| || |||||||||||||| || || || ||||||| ||| Sbjct 100574216 CATGTCTTTGTATTCTGCTCCAAAGTGCCTCCATTGGAAACCATAAACTGGTCCCAAGTC 100574275 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 |||||||| ||| | | || ||||| ||| ||||| || || | || || ||||| | Sbjct 100574276 CCCCTCTTCTCTG-GTGCAAAACCCCTGCTTATCCAAGAACTCACGTGATCCATTGGCAT 100574334 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||| ||||| || ||||| | |||||||| |||| ||||| || || Sbjct 100574335 CCCAAATCTTCACACCCTTTGCAGAGAGCTCCTTGGCATTTGTAGAACC 100574383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369496094692046