Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq23 111 4e-19 seq19 111 4e-19 >seq23 Length=10219231 Score = 111 bits (122), Expect = 4e-19 Identities = 156/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || ||||| ||||| || ||||||||||| || | | || | |||||| Sbjct 6724563 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCT 6724504 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| ||| Sbjct 6724503 TCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCT 6724444 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 ||||| || || ||| | || | | |||| ||| ||| || ||||| || || Sbjct 6724443 TGAATCTTGGCCTTCACATTTTCAATGGTGTC---ACTGGGCTCAACCTCAAGGGTGATG 6724387 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || |||||||| |||| |||||| || Sbjct 6724386 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 6724349 >seq19 Length=13198683 Score = 111 bits (122), Expect = 4e-19 Identities = 157/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| ||||| ||||| || ||||||||||| || | | || | ||| ||| Sbjct 4747634 AGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCT 4747575 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 4747574 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 4747515 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAG 152070 || || || |||||| |||| | | | | ||| || | || |||| || || | Sbjct 4747514 TGGATCTTGGCCTTGACATTCTCGATGGTATCACTGGGTTC-CACCTCCAAG-GTGATGG 4747457 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||||| ||||| ||||||||||||| |||||| || Sbjct 4747456 TCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATGTT 4747420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153784344310686