Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 1e-15 seq3 93.3 4e-14 >seq2 Length=147128157 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || ||||| | |||||| || || || ||||| ||||| | || | || || Sbjct 127698068 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCTTC 127698127 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||||||||| ||||||||||| || |||||||| || || ||||| || |||||||| Sbjct 127698128 AGCCAAAATATAGCAGCAAATGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 127698187 Query 23653 AC 23654 || Sbjct 127698188 AC 127698189 >seq3 Length=112045409 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| ||||| || | |||||||||||| || | || |||||||| |||| ||| || Sbjct 97252389 TCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGCCCAGGCATTAAGCCTCTTTTCTTC 97252330 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | |||||| |||| ||||| || || || ||||| || || || || || ||||| || Sbjct 97252329 AGCCAAAAAATTGATGCAAAAGAGCCAGAGAAGAATATTCCTTCCACTGCTGCAAATGCT 97252270 Query 23653 ACAAGACGT 23661 || | |||| Sbjct 97252269 ACTACACGT 97252261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521471925132400