Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3220 102 9e-17 seq1277 98.7 1e-15 seq1265 82.4 9e-11 >seq3220 Length=6379877 Score = 102 bits (112), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 3702153 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 3702212 Query 60126 TACTACCGAGGATTGA 60141 ||||| |||||| ||| Sbjct 3702213 TACTAACGAGGACTGA 3702228 >seq1277 Length=75614 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 74143 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 74202 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 74203 TACTAACGAGGA 74214 >seq1265 Length=1147098 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 42990 CTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCG 43049 ||| | |||||||| ||||| |||| ||| || || |||| ||||||||||||||||| Sbjct 437872 CTCACTTTTTGAATGTTGTAGTCAGACAGCGTGCGTCCGTCTTCTAGCTGCTTACCAGCA 437813 Query 43050 AATATGAGTCGCTGCTGGTC 43069 || || ||||||||||| || Sbjct 437812 AAGATCAGTCGCTGCTGATC 437793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571744292983680