Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1485 116 3e-21 seq1171 116 3e-21 >seq1485 Length=5998752 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | ||||||||||| ||| ||||||||| |||||||||||| Sbjct 4921646 GCCACCCCTCAGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 4921587 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || |||| | || |||| || || || || || |||| || ||| || || || || Sbjct 4921586 CAAGGTGCGACCATCTCCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 4921527 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || ||||||||| || || ||| || | | | | |||| | ||| || Sbjct 4921526 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAAC 4921467 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| ||| || ||||| || |||| |||||||||||||| |||||| Sbjct 4921466 CTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCATG 4921418 Score = 107 bits (118), Expect = 2e-18 Identities = 150/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| ||||| ||| ||||||||| |||||||||||| || |||| | || |||| Sbjct 4921854 CAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCA 4921795 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || || || || |||| || ||| || || || || | || ||||||||| | Sbjct 4921794 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGA 4921735 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | |||| | ||| ||||||| ||| || ||||| | Sbjct 4921734 TCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCC 4921675 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337 | |||| |||||||||||||| |||||| Sbjct 4921674 CAGTCAAGGTCTTCACAAAGATCTGCATG 4921646 >seq1171 Length=1699523 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | || | ||| || ||| ||||||||| ||||||||||| Sbjct 311341 GCCACCCCTCAGGCGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 311282 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || |||| | || ||||| || || || || || |||| || ||| || || || || Sbjct 311281 GAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 311222 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || ||||||||| ||| || ||| || | | | | |||| | ||| || Sbjct 311221 AATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAAC 311162 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||| | ||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct 311161 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTG 311110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395025817575376