Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19]
10,256 sequences; 1,203,712,246 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1485 86.0 6e-12
seq1202 84.2 2e-11
>seq1485
Length=5998752
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || || ||||| || | |||||| | || | || | |
Sbjct 4921647 ATGCAGATCTTTGTGAAGACCTTGACTGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 4921706
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||||||| | ||||| ||||| ||||| ||||| || || || |||||
Sbjct 4921707 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 4921766
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | | ||||| || || ||||||| | | | | | |||||| |||
Sbjct 4921767 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACCTTGTCCGACTACAAC 4921826
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
|| || || || || || | ||||| || ||| | || || || || ||
Sbjct 4921827 ATCCAGAAGGAGTCCACCCTGCATCTTGTGCTGCGCCTGAGGGGTGGTAA 4921876
>seq1202
Length=1309479
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776
||||| || || ||||| | ||| || |||||||||||||| ||||| || ||||||||
Sbjct 62173 GAGGGCAAGATGCACGGCTTCCTGCGGATGTACTGGGCCAAGAAGATCCTGGAGTGGACC 62232
Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836
| | |||||| |||| || || | | || || || ||||| | ||| || |||
Sbjct 62233 CGCTCCCCCGAGGAGGCCCTGCGGTTTGCCATCTACCTCAACGACCGCTACGAGCTGGAC 62292
Query 71837 GGTCGCGATCCTAACGGTTATGTCGG 71862
|| | || || ||||| ||||| ||
Sbjct 62293 GGGAGGGACCCCAACGGATATGTAGG 62318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478601035480320
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |