Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1485 95.1 1e-14 >seq1485 Length=5998752 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| || | || ||| | || || ||| ||| Sbjct 4921647 ATGCAGATCTTTGTGAAGACCTTGACTGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 4921706 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| ||||| |||||||| || || ||||| Sbjct 4921707 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 4921766 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | |||||||| || ||||||| | | | | ||| || ||| Sbjct 4921767 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACCTTGTCCGACTACAAC 4921826 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || || || || | ||| | ||| Sbjct 4921827 ATCCAGAAGGAGTCCACCCTGCATCTTGTG 4921856 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| || | || ||| | || || ||| ||| Sbjct 4921419 ATGCAGATCTTTGTGAAGACCTTGACTGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 4921478 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| ||||| |||||||| || || ||||| Sbjct 4921479 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 4921538 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | |||||||| || | ||||| | | | | ||| || ||| Sbjct 4921539 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGGAGATGGTCGCACCTTGTCCGACTACAAC 4921598 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || || || || | || || ||| Sbjct 4921599 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 4921628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429882260149680