Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1171 91.5 1e-13 seq1485 87.8 2e-12 >seq1171 Length=1699523 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | || ||| |||||| || || || ||| Sbjct 311310 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCA 311251 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || ||||||||||| ||||| |||||| || Sbjct 311250 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTC 311191 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | || ||||| ||||| || Sbjct 311190 ACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 311131 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 311130 TTCACAAAGATCTGCATG 311113 >seq1485 Length=5998752 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || || ||| |||||| || || || ||| Sbjct 4921843 GTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCAGCTGCTTGCCA 4921784 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || ||||||||||| ||||| ||||| || Sbjct 4921783 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 4921724 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| || || |||| ||| | || || || |||| || Sbjct 4921723 ACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTC 4921664 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 4921663 TTCACAAAGATCTGCATG 4921646 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || || ||| |||| | || || || ||| Sbjct 4921615 GTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCTCCCAGCTGCTTGCCA 4921556 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || ||||||||||| ||||| ||||| || Sbjct 4921555 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 4921496 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| || || |||| ||| | || || || |||| || Sbjct 4921495 ACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTC 4921436 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 4921435 TTCACAAAGATCTGCATG 4921418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420081885300672