Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq6983 87.8 2e-12 seq1085 87.8 2e-12 >seq6983 Length=297 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 || ||||| |||||||||||||||||||||||| | |||||| |||| | ||||||| Sbjct 93 GAGACCGGCACGCCGTACATGCTCTACAAAGACTCTTGCAACCGGAAGAGCAATCAGCAG 152 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 ||| |||| || || ||||| || || || || | ||||| Sbjct 153 AACCTGGGGACCATCAAATGCAGCAACCTGTGTACAGAAAT 193 >seq1085 Length=356034 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 || ||||| |||||||||||||||||||||||| | |||||| |||| | ||||||| Sbjct 330362 GAGACCGGCACGCCGTACATGCTCTACAAAGACTCTTGCAACCGGAAGAGCAATCAGCAG 330303 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 ||| |||| || || ||||| || || || || | ||||| Sbjct 330302 AACCTGGGGACCATCAAATGCAGCAACCTGTGTACAGAAAT 330262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451945253189760