Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq4057 120 2e-21 >seq4057 Length=3170749 Score = 120 bits (132), Expect = 2e-21 Identities = 129/167 (77%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 550372 TGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 ||||||| ||||| ||| ||||| |||| || | ||||||||||| || || |||| Sbjct 1158732 TGCTTTT-TTGGT--AGACTGTTACTAATGCTGTGGTGACTGTACCAGCCTACTTCAATG 1158788 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 |||| || ||||| || || |||||||||||| ||||| || || ||||| || || | Sbjct 1158789 ACTCTCAGCGTCAGGCAACAAAAGATGCTGGAACCATTGCAGGGCTCAATGTGCTGCGAA 1158848 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 |||||||||| || || |||||||| | || ||||| || || ||| Sbjct 1158849 TTATCAATGAGCCGACAGCTGCTGCGATAGCCTATGGTCTGGACAAA 1158895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028753616465440