Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1171 98.7 8e-16 seq1485 91.5 1e-13 >seq1171 Length=1699523 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| || | || || | |||| |||| ||| Sbjct 311316 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGC 311257 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| ||||| || ||||||||||| || || ||||| || Sbjct 311256 TTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTG 311197 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 311196 GCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTC 311137 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 311136 AGGGTCTTCACAAAGATCTGCATG 311113 >seq1485 Length=5998752 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| || || || || || ||||| |||| | || | |||| |||| || Sbjct 4921850 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCAGCTG 4921791 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| | ||| ||||| || ||||||||||| || || || || || Sbjct 4921790 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 4921731 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| | || || || || |||| || || || || Sbjct 4921730 GGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCAGT 4921671 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 || || || ||||| ||||||||| Sbjct 4921670 CAAGGTCTTCACAAAGATCTGCATG 4921646 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || ||||| || || || || || ||||| |||| | || | |||| || Sbjct 4921627 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCTCCC 4921568 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| |||| | ||| ||||| || ||||||||||| || || || Sbjct 4921567 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGG 4921508 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | || | |||||| | || || || || |||| || || Sbjct 4921507 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTC 4921448 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || || || ||||| ||||||||| Sbjct 4921447 CCAGTCAAGGTCTTCACAAAGATCTGCATG 4921418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396228867181392