Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1485 125 6e-24 >seq1485 Length=5998752 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| ||||||||||| || || ||||| || || || ||||| || || | Sbjct 4921645 CCACCCCTCAGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 4921586 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| | || || ||||||||| | |||| || |||||||| || ||| Sbjct 4921585 AAGGTGCGACCATCTCCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 4921526 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || |||||| | || | |||||| | || || Sbjct 4921525 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACC 4921466 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||| ||||| || ||||| |||||||| Sbjct 4921465 TCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 4921419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385171049526096