Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq6983 84.2 2e-11 seq1085 84.2 2e-11 >seq6983 Length=297 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 151334 ACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACT-TTGATTGCTTTT 151392 |||||||| | ||||| ||||||||||| || ||| || | || |||||||| || Sbjct 196 ACTATTTCTGTACACAGGTTGCTGCATTTGAT-GGTCCCCAGGTTCTGCTGATTGCTCTT 138 Query 151393 GCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTAT 151452 |||||||||| ||| ||||| | ||||||||| |||||||| || | ||| ||| || Sbjct 137 CCGGTTGCAAGAGTCTTTGTAGAGCATGTACGGCGTGCCGGTCTCCGTCTGAGATTCAAT 78 Query 151453 AAT 151455 || Sbjct 77 GAT 75 >seq1085 Length=356034 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 151334 ACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACT-TTGATTGCTTTT 151392 |||||||| | ||||| ||||||||||| || ||| || | || |||||||| || Sbjct 330259 ACTATTTCTGTACACAGGTTGCTGCATTTGAT-GGTCCCCAGGTTCTGCTGATTGCTCTT 330317 Query 151393 GCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTAT 151452 |||||||||| ||| ||||| | ||||||||| |||||||| || | ||| ||| || Sbjct 330318 CCGGTTGCAAGAGTCTTTGTAGAGCATGTACGGCGTGCCGGTCTCCGTCTGAGATTCAAT 330377 Query 151453 AAT 151455 || Sbjct 330378 GAT 330380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488481368659200