Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq6983 111 1e-19 seq1085 111 1e-19 >seq6983 Length=297 Score = 111 bits (122), Expect = 1e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| ||| ||||| | ||||||||||||||||| ||| |||| || ||||||||| Sbjct 202 TACTCCACTATTTCTGTACACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGATTG 143 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTT 147624 || ||||| ||||| | ||||||| ||||||||||||| ||||||||| || | | Sbjct 142 CTCTTCCGGTTGCAAGAGTCTTTGTAGAGCATGTACGGCGTGCCGGTCTCCGTCTGAGAT 83 Query 147625 TCAACGATA 147633 |||| |||| Sbjct 82 TCAATGATA 74 >seq1085 Length=356034 Score = 111 bits (122), Expect = 1e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| ||| ||||| | ||||||||||||||||| ||| |||| || ||||||||| Sbjct 330253 TACTCCACTATTTCTGTACACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGATTG 330312 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTT 147624 || ||||| ||||| | ||||||| ||||||||||||| ||||||||| || | | Sbjct 330313 CTCTTCCGGTTGCAAGAGTCTTTGTAGAGCATGTACGGCGTGCCGGTCTCCGTCTGAGAT 330372 Query 147625 TCAACGATA 147633 |||| |||| Sbjct 330373 TCAATGATA 330381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476550098444160