Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq113 95.1 2e-14 seq1179 86.0 9e-12 >seq113 Length=243954 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 214092 TGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGA 214151 |||| | ||| ||||||| || |||| || || ||||||||| |||||||| Sbjct 194525 TGGGGCAGGAGGTGTTTGGGCTGCTGCCGGGGCTCTGCCTGTACGCCACGCTCTGGCTGC 194466 Query 214152 GAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAAC 214211 | ||||||||| | || |||||||||||||||| ||||| || |||| |||||| | Sbjct 194465 GTGAGCACAACCGCGTCTGCGACGTGCTGAAACGGGAGCATCCCACCTGGAGCGACGAGC 194406 Query 214212 AGCTGTTCCAGA 214223 |||| ||||||| Sbjct 194405 AGCTCTTCCAGA 194394 >seq1179 Length=1708556 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 214100 GAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCAC 214159 ||| |||| || | || || || | ||| |||| || | || |||||||| || ||| Sbjct 1543807 GAGGTGTTCGGTTTGGTCCCAGGCCTGATGATGTATGCGACAATATGGCTGAGGGAACAC 1543866 Query 214160 AACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTC 214219 ||| |||| ||||| || ||||||| ||||| ||||| ||| | || || ||||||||| Sbjct 1543867 AACCGGGTCTGCGATGTCCTGAAACGGGAGCATCCGGAGTGGGATGATGAGCAGCTGTTC 1543926 Query 214220 CA 214221 || Sbjct 1543927 CA 1543928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723248067709440