Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1085 91.5 2e-13 seq6983 82.4 9e-11 >seq1085 Length=356034 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 ||||| || ||| | ||||||||||||| || || || || || ||| |||| ||||| Sbjct 323783 AACAGCCTTCTCCTCTCTCCAATGCCAACTGCTTCTACTGCTCAGATCCTGGGCAATAAC 323724 Query 105566 GAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 105625 |||| | |||| |||||||| | |||||||| | | ||| |||| ||||||||||| Sbjct 323723 GAATCCATTGAGCCCTACACCAGTAACATCTACACGCGCAGAGTCCTCTCGGGAGAGTTT 323664 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | ||||| | | ||||| || ||||| || || || |||||||| ||||||||| Sbjct 330389 TGGTACGCTATCATTGAATCTCAGACGGAGACCGGCACGCCGTACATGCTCTACAAAGAC 330330 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 | || |||| ||||| ||||| |||| |||| ||||| | ||| || ||| Sbjct 330329 TCTTGCAACCGGAAGAGCAATCAGCAGAACCTGGGGACCATCAAATGCAGCAACCTGTGT 330270 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 |||||||| |||| | ||| ||| |||||| Sbjct 330269 ACAGAAATAGTGGAGTATACCAGCAACGATGAG 330237 >seq6983 Length=297 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | ||||| | | ||||| || ||||| || || || |||||||| ||||||||| Sbjct 66 TGGTACGCTATCATTGAATCTCAGACGGAGACCGGCACGCCGTACATGCTCTACAAAGAC 125 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 | || |||| ||||| ||||| |||| |||| ||||| | ||| || ||| Sbjct 126 TCTTGCAACCGGAAGAGCAATCAGCAGAACCTGGGGACCATCAAATGCAGCAACCTGTGT 185 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 |||||||| |||| | ||| ||| |||||| Sbjct 186 ACAGAAATAGTGGAGTATACCAGCAACGATGAG 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583186025965440