Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthocomus_20hoazin_20[refseq_20GCF_5F000692075.1_202014-05-19] 10,256 sequences; 1,203,712,246 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq10248 196 6e-45 >seq10248 Length=2452803 Score = 196 bits (216), Expect = 6e-45 Identities = 555/842 (66%), Gaps = 28/842 (3%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || ||||||| ||| |||| ||||| ||| |||||||||| || || |||||| |||| Sbjct 40737 CCGCTGAGCCAGGAGGAGGCAGAGTTCCCCGTCGCCTACTCCATGGTCATCCACGACAAA 40796 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 ||||||||||||||||| |||||| || | |||| ||||| |||||| ||||||| ||| Sbjct 40797 ATCGAGATGTTCGAGCGGCTCCTGCGGTCGCTCTATGCCCCCCAGAACATCTACTGTGTC 40856 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGG-GGC-GTCTCGGCCATC---GCCA 13845 ||||||||| |||||| | | ||| | || ||| || ||||||| ||| Sbjct 40857 CACGTGGACAGGAAGTCCCCAGCTGCCTTC--CAGGAGGCTGTGCGGGCCATCATAGCC- 40913 Query 13846 GGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGA 13905 ||||| || || || |||| ||| ||| | || || || |||| ||||||| Sbjct 40914 --TGCTTTCCCAATGTCTTTGTGGCTAGCCGCCTGGAAGAGGTAGTCTACGCCTCCTGGT 40971 Query 13906 GTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGA 13965 || ||||||||||||||| ||||||| ||||||| |||||| ||| Sbjct 40972 CCCGGCTGCAGGCCGACCTCAACTGCATGCAGGACCTGTTGCAGAGCCCCGTGCCATGGC 41031 Query 13966 GGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGC 14025 ||| | |||||| || || | || ||||| |||||||||| ||||| || | Sbjct 41032 ACTACATCCTCAACACCTGTGGCACCGATTTCCCCATCAAGACCAATGCTGAGATTGTAC 41091 Query 14026 GGGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCATGCCCAACCA 14083 | || ||||||| ||| || ||| | ||||| || || | | | || ||| Sbjct 41092 GTGCCCTGAAGGTGCTGCAGGGGCGCAACAGCATGGAGTCAGAGAAGCC---CTCAGCCA 41148 Query 14084 -CAAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACA 14142 ||||| | | ||| || | |||| |||| || | | | || | Sbjct 41149 TCAAGCAGGAGCGCTGGCGGTACCACCACGAAGTGG-----GGAAG-TTCATCTTCCGGA 41202 Query 14143 CCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACT 14202 | | || || || ||||| || | || ||||| || |||| ||||| ||| Sbjct 41203 CAGCCACAAAGAAACTGCCGCCACCCCACAACTCTCCCATGTTCACGGGCAACGCATACA 41262 Query 14203 TTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGC--- 14259 | | |||||| || | |||||| | | || ||||| || || |||| | || Sbjct 41263 TCGTGGTCACGCGAGCCTTCGTGCAGCACATCTTCAAGAAC---CCCATGGCGCAGCAGT 41319 Query 14260 TCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGA 14319 || | | |||| | ||||||| |||||||| ||||||||| | ||||||||| | | Sbjct 41320 TCCTCGAGTGGTCCAAGGACACCTACAGCCCTGACGAGCACGTCTGGGCCACCCTCAACC 41379 Query 14320 GAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGT 14379 | ||| || ||| || | || ||| ||| ||| | | | |||||| ||| Sbjct 41380 GCATGCCTGGCGTGCCGGGCGCCATGCCCCAGAACGACAAATTCCAGCTCTCGGATATGA 41439 Query 14380 GGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCC 14439 ||| | | | | ||||| ||| ||| ||||| || | || || || || | Sbjct 41440 ACGCCCTGCCCCGCCTGGTCAAATGGGCATACCTGGAGGGTGACACCAGCAAGGGTGCGC 41499 Query 14440 TGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACG 14499 |||||||| ||| |||| ||| | |||| ||||||||| |||| ||||||| Sbjct 41500 CCTACCCGCCCTGCACCGGCCGGCACCAGCGCGCCGTCTGCATCTACGGGGTGGGCGACG 41559 Query 14500 TG 14501 || Sbjct 41560 TG 41561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658654749634560