Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parus_20major_20[refseq_20GCF_5F001522545.2_202016-06-30] 1,675 sequences; 1,020,310,768 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 >seq2 Length=150265477 Score = 116 bits (128), Expect = 3e-21 Identities = 120/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCG 20460 ||||||||||||||||| ||| || ||||| || || ||| ||| ||||||||| Sbjct 103649634 ATGGCTTTGCCTCCATGCCATGCCCTTTGCCAGTTCTATGTTCTAAATGGTGAATTGTCT 103649575 Query 20461 TGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGT 20520 || ||| | ||||| | || | || |||||||| || || || || |||||||| || Sbjct 103649574 TGCCAACTCTATCAGAGGTCTGGAGACATGGGACTAGGAGTGCCCTTTAATATTGCCAGC 103649515 Query 20521 TATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct 103649514 TATTCACTGCTCACGTACATGATTGCCCATGTCACAG 103649478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399175851032875