Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parus_20major_20[refseq_20GCF_5F001522545.2_202016-06-30] 1,675 sequences; 1,020,310,768 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 3e-11 >seq2 Length=150265477 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 |||| ||||| || | ||| || ||||| ||||||||| | || || | |||||||| | Sbjct 67762309 CACCGTAAGGCGATCTTGGGTAAAAAGGGGTGGTCTCTTTTTGCGGGATTTCTTGCACTT 67762368 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATA 48164 | ||| |||||||||||||||| ||||| || Sbjct 67762369 TTCCAAAAAGTTCACTGGTGGAGGCTTGGTA 67762399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665480466211000