Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parus_20major_20[refseq_20GCF_5F001522545.2_202016-06-30] 1,675 sequences; 1,020,310,768 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 3e-12 >seq3 Length=111636321 Score = 87.8 bits (96), Expect = 3e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 39168 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 39227 |||||| |||||| | ||| |||||||||||||| || || |||||||| ||||||||| Sbjct 98374635 TCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTCAGCCAAAAAATTGATGCA 98374576 Query 39228 AAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTATTA 39273 ||| | ||| ||||| || || ||||| ||||| |||| || Sbjct 98374575 AAAGAGCCAGAGAAGAAGATGCCTTCCACTGCTGCAAAGGCTACTA 98374530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905117048715000