Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parus_20major_20[refseq_20GCF_5F001522545.2_202016-06-30] 1,675 sequences; 1,020,310,768 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq29 87.8 2e-12 >seq29 Length=4327975 Score = 87.8 bits (96), Expect = 2e-12 Identities = 97/128 (76%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 146449 GACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCCCTTCTCTA-CC 146507 |||||||||||| || || ||| | ||||||||||||||||| || | | ||| | || Sbjct 1177146 GACCATCATTAACTTGGCTCAGAACTTTGTGGGCAGCAATAACCTCAACTTGCTCCAGCC 1177087 Query 146508 AGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAGTCCCAGATATAT 146567 ||| || || || |||||| || | |||||||| ||| |||| || || |||| || Sbjct 1177086 CATTGGTCAGTTTGGCACAAGGCTGCACGGAGGGAAAGACTCTGCCAGCCCTCGATACAT 1177027 Query 146568 TTTCACCA 146575 ||||||| Sbjct 1177026 CTTCACCA 1177019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521534680139000