Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passer_20domesticus_20[genbank_20GCA_5F001700915.1_202016-08-31] 2,301 sequences; 1,042,720,703 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq12 120 2e-22 >seq12 Length=147836772 Score = 120 bits (132), Expect = 2e-22 Identities = 140/184 (76%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| |||| |||||||||||| || ||||| ||||| | || Sbjct 46352370 CATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATACACTGGTCCCAAATC 46352429 Query 25833 TCCATCTTCCCT-GTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || || || || ||||| ||| ||| |||||||| || || | || ||||| || | Sbjct 46352430 ACCCTCCTCTCTGGTGCTGAAA-CCCTGCTTATCCAGGAACTCACGCGACCCATTAGCAT 46352488 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| ||||| || || || | ||||||||||||| |||||||| || || || || | Sbjct 46352489 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTGGAACC-CT-ACAAAAC 46352546 Query 25952 ACAG 25955 |||| Sbjct 46352547 ACAG 46352550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340128061372473