Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passer_20domesticus_20[genbank_20GCA_5F001700915.1_202016-08-31] 2,301 sequences; 1,042,720,703 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq22 98.7 2e-15 >seq22 Length=110987800 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 39167 TTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGC 39226 ||||||| |||||| | ||| |||||||||||||| || || |||||||| |||||||| Sbjct 97729159 TTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTCAGCCAAAAAATTGATGC 97729100 Query 39227 AAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTA 39270 |||| | ||||||||| || || |||||| ||||| |||| Sbjct 97729099 AAAAGAGCCAGAAAAGAAGATTCCTTCCACAGCTGCAAAGGCTA 97729056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905109966025800