Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passer_20domesticus_20[genbank_20GCA_5F001700915.1_202016-08-31] 2,301 sequences; 1,042,720,703 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq22 129 7e-25 >seq22 Length=110987800 Score = 129 bits (142), Expect = 7e-25 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729 || || |||| |||| | |||| ||||| || |||||| | ||||| | |||||||| Sbjct 73793407 GCTTTATGGTGGTATTATGTCTCCAAAGGAATTGAATATTTGGATACAGTATTCTTCATC 73793348 Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789 |||| ||||||||||||||| |||| || | || || || |||||||| |||||||| Sbjct 73793347 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTCCATGTCTATCACCATTTCACCATGTTC 73793288 Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || || | ||||| || ||||| ||| ||||||| ||||| Sbjct 73793287 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 73793247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603163451012240