Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09]
63,982 sequences; 1,160,924,693 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq29751 109 5e-19
seq30096 96.9 3e-15
>seq29751
Length=8246
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || | ||| | || || || || |||||||| || || || |||| |
Sbjct 10 CGCAGCACAAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGAGTGCGCCCA 69
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || |||||| ||||||| | ||||||||||| || |||||||| |||
Sbjct 70 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 129
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | |||||| ||||||| ||||||| ||| |
Sbjct 130 TCCTGGATCTTCGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATG 189
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||||| |||| || || || || || |||||
Sbjct 190 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 224
>seq30096
Length=29002
Score = 96.9 bits (106), Expect = 3e-15
Identities = 86/105 (82%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 153684 ACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTT-TGATTGCTTTT 153742
|||||||||| ||||| |||||||||||| || | || ||| | || |||||||| ||
Sbjct 17524 ACTATTTCCGTACACAGATTGCTGCATTTGATG-GTCCCCAAGTTCTGCTGATTGCTCTT 17582
Query 153743 GCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787
||||| |||| ||| ||||| |||||||| ||||||||||| ||
Sbjct 17583 CCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTC 17627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495667260414400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |