Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1923 118 2e-22 >seq1923 Length=15970 Score = 118 bits (130), Expect = 2e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 1368 CGCCAAGCGGCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCAT 1309 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || |||||||| || || || || ||||| |||| || || |||| || |||| Sbjct 1308 CCGGCGCCTGGCTCGGCGCGGCGGCGTGAAGCGCATCTCGGGGCTGATCTACGAGGAGAC 1249 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| ||||||| ||| ||| |||| || || || ||| || || Sbjct 1248 GCGCGGCGTGCTGAAGGTCTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACGGA 1189 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644 |||||| || | ||||| || || ||||||| Sbjct 1188 GCACGCCAAGAGGAAGACGGTGACGGCCATGGA 1156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79016700809526