Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1803 98.7 3e-15 >seq1803 Length=26599 Score = 98.7 bits (108), Expect = 3e-15 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||||||||| || ||||| | ||||| ||| || |||||||||| ||||||||||| Sbjct 1801 TACAAATGCCAAAGAACTCTCTGCAAAGGGTGTGAAGATTTGGGATGCTAATGGATCACG 1860 Query 111449 TGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 ||| || || ||| ||| ||| | | || || || || ||| | ||||||||| Sbjct 1861 TGAGTTCCTGGATAAGCAG--GGTTTCAGCACCAGAGAGGAGGGAGATTTGGGACCAGTT 1918 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCA 111553 || || || || ||| | |||||||| ||||| |||||| ||||| Sbjct 1919 TATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCA 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302285150633924